STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_03325AB hydrolase-1 domain-containing protein. (325 aa)    
Predicted Functional Partners:
AMAG_01067
Uncharacterized protein.
     
 0.663
AMAG_05249
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.663
AMAG_03118
Small GTP-binding protein domain.
    
  0.630
AMAG_10389
Uncharacterized protein.
    
  0.630
AMAG_01259
Ornithine aminotransferase.
     
 0.608
AMAG_05450
Ornithine aminotransferase.
     
 0.608
AMAG_06001
Methyltransf_33 domain-containing protein.
   
 0.607
AMAG_18571
FGE-sulfatase domain-containing protein.
   
 0.607
AMAG_09379
Uncharacterized protein.
   
 0.607
AMAG_11633
Uncharacterized protein.
   
 0.607
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.