STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_11684CBFD_NFYB_HMF domain-containing protein. (118 aa)    
Predicted Functional Partners:
AMAG_13014
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.978
AMAG_14101
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.978
AMAG_01800
TATA-box-binding protein 2.
    
 
 0.974
AMAG_04303
TATA-box-binding protein 2.
    
 
 0.974
AMAG_15601
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.974
AMAG_03261
N-acetyltransferase domain-containing protein.
    
 0.967
AMAG_05283
Uncharacterized protein.
   
 0.931
AMAG_00374
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.922
AMAG_01898
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.922
AMAG_16630
Uncharacterized protein.
   
 
 0.919
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.