STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_17146VPS9 domain-containing protein. (561 aa)    
Predicted Functional Partners:
AMAG_05522
Small GTP-binding protein domain.
    
 0.885
AMAG_07692
Small GTP-binding protein domain.
    
 0.885
AMAG_09814
Small GTP-binding protein domain.
    
 0.885
AMAG_10598
Lysophospholipase.
    
 0.776
AMAG_14666
Uncharacterized protein.
    
 0.746
AMAG_01433
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.739
AMAG_05634
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.739
AMAG_05745
Uncharacterized protein.
    
 0.739
AMAG_12288
Uncharacterized protein.
    
 0.739
AMAG_12318
WD_REPEATS_REGION domain-containing protein.
    
 0.739
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.