Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACS85184.1 | ACS85185.1 | Dd703_1382 | Dd703_1383 | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4670 transcriptional regulator, LysR family. | 0.625 |
| ACS85184.1 | ACS85938.1 | Dd703_1382 | Dd703_2151 | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: kpn:KPN_01124 PTS family enzyme IIA, glucitol/sorbitol-specific. | 0.600 |
| ACS85184.1 | ACS87238.1 | Dd703_1382 | Dd703_3478 | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | PFAM: protein of unknown function DUF1440; KEGG: cje:Cj0014c putative integral membrane protein. | 0.423 |
| ACS85184.1 | aroD | Dd703_1382 | Dd703_1386 | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.755 |
| ACS85184.1 | rhaD | Dd703_1382 | Dd703_3487 | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.425 |
| ACS85184.1 | ydiB | Dd703_1382 | Dd703_1385 | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | Shikimate dehydrogenase substrate binding domain protein; The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD. | 0.758 |
| ACS85185.1 | ACS85184.1 | Dd703_1383 | Dd703_1382 | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4670 transcriptional regulator, LysR family. | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | 0.625 |
| ACS85185.1 | aroD | Dd703_1383 | Dd703_1386 | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4670 transcriptional regulator, LysR family. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.436 |
| ACS85185.1 | ydiB | Dd703_1383 | Dd703_1385 | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4670 transcriptional regulator, LysR family. | Shikimate dehydrogenase substrate binding domain protein; The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD. | 0.460 |
| ACS85938.1 | ACS85184.1 | Dd703_2151 | Dd703_1382 | PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: kpn:KPN_01124 PTS family enzyme IIA, glucitol/sorbitol-specific. | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | 0.600 |
| ACS87238.1 | ACS85184.1 | Dd703_3478 | Dd703_1382 | PFAM: protein of unknown function DUF1440; KEGG: cje:Cj0014c putative integral membrane protein. | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | 0.423 |
| aroD | ACS85184.1 | Dd703_1386 | Dd703_1382 | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | 0.755 |
| aroD | ACS85185.1 | Dd703_1386 | Dd703_1383 | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4670 transcriptional regulator, LysR family. | 0.436 |
| aroD | ydiB | Dd703_1386 | Dd703_1385 | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Shikimate dehydrogenase substrate binding domain protein; The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD. | 0.989 |
| rhaD | ACS85184.1 | Dd703_3487 | Dd703_1382 | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | 0.425 |
| ydiB | ACS85184.1 | Dd703_1385 | Dd703_1382 | Shikimate dehydrogenase substrate binding domain protein; The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD. | PFAM: major facilitator superfamily MFS_1; KEGG: sew:SeSA_A1457 inner membrane transport protein YdiM. | 0.758 |
| ydiB | ACS85185.1 | Dd703_1385 | Dd703_1383 | Shikimate dehydrogenase substrate binding domain protein; The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD. | Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4670 transcriptional regulator, LysR family. | 0.460 |
| ydiB | aroD | Dd703_1385 | Dd703_1386 | Shikimate dehydrogenase substrate binding domain protein; The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD. | 3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.989 |