STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS86114.1TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2730 sugar efflux transporter. (392 aa)    
Predicted Functional Partners:
ACS85653.1
PFAM: protein of unknown function DUF1471; KEGG: eca:ECA2203 hypothetical protein.
  
     0.638
ACS84883.1
KEGG: ypg:YpAngola_A3139 hypothetical protein.
  
     0.556
ACS87144.1
KEGG: eca:ECA0648 hypothetical protein.
  
     0.538
ACS86113.1
Phosphocarrier, HPr family; KEGG: eca:ECA2729 bifunctional fructose-specific PTS IIA/HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr.
 
   
 0.500
ACS87340.1
KEGG: eca:ECA0372 hypothetical protein; Belongs to the UPF0306 family.
  
     0.493
ACS86509.1
PFAM: protein of unknown function DUF1407; KEGG: spe:Spro_3603 hypothetical protein.
  
     0.462
ACS86111.1
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; KEGG: eca:ECA2727 fructose-specific PTS system IIBC component.
   
 
 0.458
mzrA
Conserved hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.448
ACS85158.1
PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: eca:ECA1560 CDP-diacylglycerol pyrophosphatase.
  
    0.443
aaeX
PFAM: protein of unknown function DUF1656; KEGG: eca:ECA0277 hypothetical protein.
  
   
 0.439
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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