STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS86827.1TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: spe:Spro_3427 enterobactin synthase subunit F. (1310 aa)    
Predicted Functional Partners:
ACS85288.1
PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: spe:Spro_3419 isochorismatase.
 
 
 0.999
ACS86846.1
PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: esa:ESA_00798 hypothetical protein.
 
 
 0.999
ACS85228.1
KEGG: bsu:BSU17180 polyketide synthase of type I.
  
 
 0.998
ACS86841.1
PFAM: Beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bte:BTH_I2363 polyketide synthase.
 
 0.998
ACS85293.1
PFAM: MbtH domain protein; KEGG: cvi:CV_2232 MbtH-like protein.
 
 
 0.996
ACS86829.1
PFAM: MbtH domain protein; KEGG: pae:PA2412 hypothetical protein.
 
 
 0.996
ACS85225.1
6-methylsalicylic acid synthase., 6-deoxyerythronolide-B synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17190 polyketide synthase of type I.
 
 0.995
ACS85227.1
PFAM: KR domain protein; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17180 polyketide synthase of type I.
 
 0.995
ACS85289.1
TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_3420 enterobactin synthase subunit E.
 
0.995
ACS86845.1
TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: esa:ESA_00797 enterobactin synthase subunit E.
 
0.995
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.