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Slit_0031 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0031" - Exodeoxyribonuclease III Xth in Sideroxydans lithotrophicus
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Slit_0031Exodeoxyribonuclease III Xth (288 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (210 aa)
 
 
  0.991
Slit_0002
DNA polymerase III, subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (367 aa)
     
  0.980
Slit_2833
DNA polymerase I (929 aa)
     
  0.979
Slit_1536
DNA polymerase III, delta prime subunit (335 aa)
     
    0.925
Slit_0427
A/G-specific adenine glycosylase (353 aa)
     
  0.923
Slit_2928
Exodeoxyribonuclease III Xth (252 aa)
   
   
0.848
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (214 aa)
   
   
  0.801
Slit_0166
Hypothetical protein (164 aa)
   
 
    0.684
Slit_0470
Histidinol-phosphate phosphatase family protein (177 aa)
   
 
  0.676
Slit_0029
Hypothetical protein (206 aa)
              0.656
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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