STRINGSTRING
Slit_0289 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0289" - Disulfide bond isomerase, DsbC/G-like protein in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0289Disulfide bond isomerase, DsbC/G-like protein (236 aa)    
Predicted Functional Partners:
dsbD
Cytochrome C biogenesis protein transmembrane region; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps (594 aa)
   
 
  0.890
Slit_0290
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family (384 aa)
              0.858
Slit_0288
Hypothetical protein (151 aa)
              0.796
Slit_2768
Cytochrome C biogenesis protein transmembrane region (565 aa)
   
 
  0.753
dsbB
Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein (167 aa)
   
 
  0.706
dusB
TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (335 aa)
              0.592
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning (1177 aa)
 
          0.551
Slit_0128
DSBA oxidoreductase (206 aa)
   
 
  0.544
Slit_0647
Glutathione S-transferase domain protein (199 aa)
   
          0.536
Slit_1792
Periplasmic protein thiol/disulfide oxidoreductase DsbE (175 aa)
   
 
  0.534
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (12%) [HD]