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Slit_0301 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0301" - LysR family transcriptional regulator in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
Slit_0301LysR family transcriptional regulator (301 aa)    
Predicted Functional Partners:
Slit_0300
Methyltransferase type 11 (211 aa)
              0.859
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (447 aa)
     
 
  0.796
Slit_2677
Peroxiredoxin (200 aa)
         
  0.682
Slit_0713
Catalase; Has an organic peroxide-dependent peroxidase activity (340 aa)
         
  0.682
Slit_0305
Ferritin Dps family protein (160 aa)
         
  0.642
Slit_0302
Rubrerythrin (138 aa)
              0.614
Slit_0944
DnaA regulatory inactivator Hda (217 aa)
       
      0.601
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (673 aa)
   
   
  0.554
Slit_0115
Glutamate synthase (ferredoxin) (1565 aa)
         
  0.526
Slit_1168
LysR family transcriptional regulator (299 aa)
   
     
  0.495
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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