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Slit_0560 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0560" - MotA/TolQ/ExbB proton channel in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0560MotA/TolQ/ExbB proton channel (249 aa)    
Predicted Functional Partners:
Slit_0561
OmpA/MotB domain protein (259 aa)
 
  0.999
Slit_0543
OmpA/MotB domain protein (341 aa)
   
  0.993
Slit_0556
Flagellar biosynthesis protein FlhA (694 aa)
 
   
  0.975
Slit_0558
MinD-related protein (297 aa)
 
     
  0.965
fliA
RNA polymerase, sigma 28 subunit, FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (247 aa)
   
   
  0.935
Slit_0548
Response regulator receiver modulated CheW protein (315 aa)
 
   
  0.930
Slit_0557
Flagellar biosynthetic protein FlhF (438 aa)
 
     
  0.927
Slit_0555
Flagellar biosynthetic protein FlhB (381 aa)
 
   
  0.927
Slit_0597
Flagellar motor switch protein FliG (329 aa)
 
   
  0.920
Slit_2936
CheA signal transduction histidine kinase (1739 aa)
 
   
  0.905
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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