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Slit_0687 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0687" - Pilus (MSHA type) biogenesis protein MshL in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0687Pilus (MSHA type) biogenesis protein MshL (614 aa)    
Predicted Functional Partners:
Slit_0685
Type II secretion system protein E (568 aa)
 
 
  0.986
Slit_0684
Type II secretion system F domain protein (400 aa)
 
 
  0.983
Slit_0686
Hypothetical protein (374 aa)
 
          0.976
Slit_0679
Hypothetical protein (225 aa)
 
          0.955
Slit_0688
Sporulation domain protein (517 aa)
 
     
  0.899
Slit_2608
Type II secretion system protein E (567 aa)
 
 
  0.870
Slit_2073
Type II secretion system protein E (592 aa)
 
 
  0.851
Slit_0683
Hypothetical protein (493 aa)
              0.848
Slit_0682
Hypothetical protein (198 aa)
              0.847
Slit_1825
Type II and III secretion system protein (851 aa)
 
   
0.844
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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