STRINGSTRING
Slit_0869 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0869" - Cytochrome C family protein in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0869Cytochrome C family protein (533 aa)    
Predicted Functional Partners:
Slit_0870
Hypothetical protein (299 aa)
              0.912
Slit_1446
Hypothetical protein (301 aa)
 
          0.861
Slit_0868
Cytochrome C family protein (524 aa)
 
       
0.806
Slit_0866
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (430 aa)
 
          0.782
Slit_0525
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (431 aa)
 
          0.782
Slit_1812
Hypothetical protein (535 aa)
   
          0.733
Slit_2528
Hypothetical protein (246 aa)
   
          0.698
Slit_1827
Hypothetical protein (189 aa)
   
          0.640
Slit_1818
Multicopper oxidase type 2 (515 aa)
   
          0.625
Slit_2291
FeoA family protein (77 aa)
   
          0.622
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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