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Slit_0890 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_0890" - O-methyltransferase family 3 in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_0890O-methyltransferase family 3 (228 aa)    
Predicted Functional Partners:
Slit_0891
Hypothetical protein (191 aa)
              0.859
Slit_0892
Hypothetical protein (153 aa)
              0.850
Slit_0889
Metal dependent phosphohydrolase (202 aa)
              0.692
Slit_0893
Hypothetical protein (49 aa)
              0.663
Slit_0393
6-phosphogluconolactonase (228 aa)
            0.488
Slit_2933
Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (148 aa)
 
          0.484
Slit_0113
3-dehydroquinate synthase (546 aa)
   
   
  0.447
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (873 aa)
         
  0.436
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate (147 aa)
              0.414
Slit_2532
Peptidase U32 (649 aa)
              0.414
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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