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Slit_1021 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1021" - Hypothetical protein in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1021Hypothetical protein (163 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase (408 aa)
              0.783
Slit_1020
Hypothetical protein (107 aa)
              0.763
Slit_1019
Hypothetical protein (162 aa)
              0.572
Slit_0672
Hypothetical protein (345 aa)
   
 
    0.567
hscA
Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (622 aa)
     
    0.512
dnaK
Chaperone protein DnaK; Acts as a chaperone (641 aa)
     
    0.512
Slit_1540
Histone deacetylase (307 aa)
       
    0.511
Slit_0491
General secretion pathway L (402 aa)
   
          0.510
Slit_1018
Phosphoesterase PA-phosphatase related protein (250 aa)
              0.509
Slit_1017
DJ-1 family protein (181 aa)
              0.509
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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