STRINGSTRING
Slit_1163 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1163" - Response regulator receiver protein in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1163Response regulator receiver protein (175 aa)    
Predicted Functional Partners:
Slit_1160
Multi-sensor hybrid histidine kinase (908 aa)
          0.807
Slit_0331
PAS/PAC sensor signal transduction histidine kinase (440 aa)
 
          0.800
Slit_1013
Transcriptional regulator (222 aa)
   
          0.746
Slit_1590
Response regulator receiver protein (122 aa)
 
          0.738
Slit_1289
Multi-sensor hybrid histidine kinase (837 aa)
 
          0.738
Slit_2582
Integral membrane sensor hybrid histidine kinase (606 aa)
 
          0.736
Slit_1761
Integral membrane sensor hybrid histidine kinase (587 aa)
 
          0.726
Slit_2389
Transcriptional regulator (228 aa)
   
          0.717
Slit_2828
Multi-sensor signal transduction histidine kinase (450 aa)
 
          0.695
Slit_2493
Integral membrane sensor signal transduction histidine kinase (464 aa)
 
 
      0.689
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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