STRINGSTRING
Slit_1198 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1198" - ATPase P in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1198ATPase P (888 aa)    
Predicted Functional Partners:
Slit_0637
MgtC/SapB transporter (249 aa)
 
 
  0.911
Slit_1197
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (226 aa)
   
        0.862
Slit_0442
Sodium/hydrogen exchanger (666 aa)
   
  0.790
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Cell wall formation (231 aa)
     
      0.737
Slit_0115
Glutamate synthase (ferredoxin) (1565 aa)
   
   
  0.673
Slit_1868
ATPase P (785 aa)
   
 
0.640
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (583 aa)
     
  0.639
Slit_1474
ATPase P (748 aa)
   
 
0.638
Slit_0418
ATPase P (820 aa)
   
 
0.637
Slit_1669
Ankyrin (190 aa)
     
    0.630
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (11%) [HD]