STRINGSTRING
Slit_1319 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1319" - Hypothetical protein in Sideroxydans lithotrophicus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1319Hypothetical protein (163 aa)    
Predicted Functional Partners:
Slit_1320
Major facilitator superfamily MFS_1 (401 aa)
              0.859
Slit_1318
Hypothetical protein (131 aa)
              0.805
Slit_1317
Flavin reductase domain protein FMN-binding protein (178 aa)
   
        0.787
Slit_1316
Hypothetical protein (144 aa)
              0.582
Slit_1322
Hypothetical protein (208 aa)
              0.486
Slit_1321
Cytochrome B561 (214 aa)
              0.486
Slit_1323
Hypothetical protein (134 aa)
              0.471
Slit_1324
Diheme Cytochrome C (187 aa)
              0.460
Slit_1315
Helicase c2 (641 aa)
   
        0.448
Slit_1325
Hsp33 protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress (294 aa)
 
        0.447
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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