STRINGSTRING
Slit_1451 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1451" - Hypothetical protein in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1451Hypothetical protein (531 aa)    
Predicted Functional Partners:
Slit_0797
SCP-like extracellular (172 aa)
   
          0.648
Slit_0506
NHL repeat-containing protein (385 aa)
 
          0.644
Slit_1450
Fructose-bisphosphate aldolase (349 aa)
              0.641
Slit_1454
AFG1-family ATPase (380 aa)
              0.582
Slit_1453
Glyoxalase/bleomycin resistance protein/dioxygenase (124 aa)
              0.582
purT
Phosphoribosylglycinamide formyltransferase 2; Catalyzes two reactions- the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP (401 aa)
              0.582
Slit_1688
CRISPR-associated protein, Cas6-related protein (200 aa)
   
          0.557
Slit_1543
Adenylate/guanylate cyclase (406 aa)
   
          0.462
Slit_1170
Hypothetical protein (246 aa)
   
          0.435
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (6%) [HD]