STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ44370.1Phage shock protein C (PspC) family protein. (677 aa)    
Predicted Functional Partners:
SIQ22499.1
Phage shock protein A (PspA) family protein.
  
 
 0.991
SIQ44399.1
Phage shock protein C (PspC) family protein.
 
    0.965
SIR98019.1
Putative membrane protein.
 
    0.857
SIQ49511.1
ABC-2 type transport system permease protein.
 
    0.850
SIQ44334.1
Hypothetical protein.
       0.773
SIR85493.1
Putative adhesin.
 
  
 0.764
SIR35348.1
Hypothetical protein.
  
     0.752
SIR85303.1
Putative adhesin.
 
  
 0.749
SIQ91351.1
Sulfotransferase family protein.
  
     0.744
SIQ18072.1
Helicase conserved C-terminal domain-containing protein.
  
     0.721
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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