STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR63742.1Polar amino acid transport system ATP-binding protein. (253 aa)    
Predicted Functional Partners:
SIR02507.1
Polar amino acid transport system permease protein.
  0.985
SIR63703.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.978
SIR63721.1
Polar amino acid transport system permease protein.
  0.978
SIS21617.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.973
SIS24688.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.962
SIR63682.1
Polar amino acid transport system substrate-binding protein.
 
  0.947
SIS16963.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.946
SIR84837.1
Glutamate transport system permease protein.
 0.943
SIR84862.1
Glutamate transport system permease protein.
 0.943
SIS16970.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.943
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.