STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR78387.1Threonine dehydrogenase. (391 aa)    
Predicted Functional Partners:
SIR78372.1
Hypothetical protein.
  
    0.799
SIR54154.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.721
SIR58989.1
Threonine dehydrogenase.
 
  0.665
SIR78060.1
Threonine dehydrogenase.
 
 
0.622
SIR60631.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
 
  0.621
SIR74614.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
 
  0.621
SIQ76690.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.609
SIR99870.1
Alcohol dehydrogenase, propanol-preferring.
 
 
0.605
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.602
SIS23855.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 
0.598
Your Current Organism:
Microbispora rosea
NCBI taxonomy Id: 58117
Other names: ATCC 12950, DSM 43839, IFO 14044, JCM 3006, M. rosea, NBRC 14044, NRRL B-2632, VKM Ac-634, Waksmania rosea
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