STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718255_01311Unannotated protein. (134 aa)    
Predicted Functional Partners:
GCA_000718255_01312
Unannotated protein.
       0.773
GCA_000718255_01838
Unannotated protein.
    
 0.772
GCA_000718255_00369
Unannotated protein.
    
 0.746
GCA_000718255_04956
Unannotated protein.
    
  0.735
GCA_000718255_02204
Unannotated protein.
    
 0.722
GCA_000718255_01337
Unannotated protein.
    
  0.717
GCA_000718255_04482
Unannotated protein.
  
 
  0.712
GCA_000718255_01313
Unannotated protein.
       0.707
GCA_000718255_00865
Unannotated protein.
    
  0.626
GCA_000718255_01314
Unannotated protein.
       0.475
Your Current Organism:
Spirillospora albida
NCBI taxonomy Id: 58123
Other names: ATCC 15331, DSM 43034, IFO 12248, JCM 3041, NBRC 12248, NRRL B-3350, S. albida, VKM Ac-926
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