STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718255_01721Unannotated protein. (807 aa)    
Predicted Functional Partners:
GCA_000718255_00025
Unannotated protein.
 
 0.994
GCA_000718255_01525
Unannotated protein.
 
 0.870
GCA_000718255_01145
Unannotated protein.
 
 
 0.839
GCA_000718255_04659
Unannotated protein.
  
 
 0.826
GCA_000718255_04753
Unannotated protein.
  
 0.813
GCA_000718255_00459
Unannotated protein.
     
 0.767
GCA_000718255_00441
Unannotated protein.
 
 0.676
GCA_000718255_03178
Unannotated protein.
 
 
 0.659
GCA_000718255_02205
Unannotated protein.
 
 
 0.652
GCA_000718255_03618
Unannotated protein.
  
 
 0.588
Your Current Organism:
Spirillospora albida
NCBI taxonomy Id: 58123
Other names: ATCC 15331, DSM 43034, IFO 12248, JCM 3041, NBRC 12248, NRRL B-3350, S. albida, VKM Ac-926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.