STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_0104400Nucleoside diphosphate kinase, putative; Belongs to the NDK family. (1657 aa)    
Predicted Functional Partners:
PBANKA_1231000
40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS11 family.
  
 0.994
PBANKA_0611600
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.987
A0A509ASR4
30S ribosomal protein S2, putative.
   
 0.975
PBANKA_0619100
40S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS7 family.
  
 0.972
PBANKA_0510900
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.968
PBANKA_1201900
40S ribosomal protein S20e, putative.
   
 0.965
PBANKA_1324600
Apicoplast ribosomal protein S10, putative.
   
 0.965
PBANKA_1245600
Ribosomal protein S16, mitochondrial, putative.
  
 0.964
PBANKA_0911200
Apicoplast ribosomal protein S14p/S29e, putative.
   
 0.960
PBANKA_1420200
Mitochondrial ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS5 family.
  
 0.960
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.