STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1008200cGMP-dependent protein kinase. (856 aa)    
Predicted Functional Partners:
PBANKA_0835600
cAMP-dependent protein kinase catalytic subunit; Belongs to the protein kinase superfamily.
  
0.999
PBANKA_0902600
Leucine-rich repeat protein.
  
 0.756
PBANKA_0915600
Aquaglyceroporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.722
PBANKA_1442000
Potassium channel K1.
   
 
 0.712
PBANKA_1354100
Ras-related protein Rab-11B, putative.
    
 0.638
PBANKA_1418900
Ras-related protein Rab-11A.
    
 0.638
PBANKA_0401900
DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative.
    
 
 0.611
PBANKA_1109000
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.597
PBANKA_1344000
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.597
PBANKA_0505100
ADP-ribosylation factor, putative; Belongs to the small GTPase superfamily. Arf family.
    
 0.569
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.