STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBANKA_1420900Palmitoyltransferase DHHC4, putative. (1006 aa)    
Predicted Functional Partners:
PBANKA_0207400
3'-5' exonuclease, putative.
    
 0.678
PBANKA_1014800
ADP-dependent DNA helicase RecQ, putative.
    
 0.678
PBANKA_0104600
DNA repair protein RAD50, putative.
    
 0.604
PBANKA_0205600
Double-strand break repair protein MRE11, putative.
    
 0.552
PBANKA_1218800
ABC transporter I family member 1, putative.
   
 
 0.512
PBANKA_1412600
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.508
PBANKA_0502300
tRNA pseudouridine synthase, putative.
    
 0.488
PBANKA_1025200
H/ACA ribonucleoprotein complex subunit 4, putative.
    
 0.488
PBANKA_1018100
ABC transporter G family member 2, putative.
   
 
 0.476
PBANKA_0936500
Replication factor C subunit 5, putative.
     
 0.466
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.