STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_0175KEGG: pat:Patl_2350 hypothetical protein. (399 aa)    
Predicted Functional Partners:
Hbal_0174
PFAM: natural resistance-associated macrophage protein; KEGG: pat:Patl_3815 natural resistance-associated macrophage protein.
 
     0.833
Hbal_0172
PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: dat:HRM2_46540 putative allophanate hydrolase subunit 1.
  
    0.794
Hbal_0171
PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; KEGG: spe:Spro_1256 UreA amidolyase related protein.
       0.790
Hbal_0173
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.790
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.523
Hbal_0170
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: abo:ABO_1992 hypothetical protein.
       0.464
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.