STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_0656PFAM: protein of unknown function DUF736; KEGG: tgr:Tgr7_1873 protein of unknown function DUF736. (102 aa)    
Predicted Functional Partners:
Hbal_0658
PFAM: conjugation TrbI family protein; KEGG: xau:Xaut_2995 conjugation TrbI family protein.
 
     0.948
Hbal_0659
TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pla:Plav_1842 P-type conjugative transfer protein TrbG.
 
     0.948
Hbal_0662
TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: oca:OCAR_4186 conjugal transfer protein TrbL.
 
     0.948
Hbal_0660
PFAM: Conjugal transfer protein; KEGG: mlo:mlr6403 conjugal transfer protein TrbF.
 
     0.947
Hbal_0663
TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: nwi:Nwi_2096 conjugal transfer protein TrbJ.
 
     0.947
Hbal_0665
KEGG: pap:PSPA7_3704 conjugal transfer protein.
 
     0.947
Hbal_0666
PFAM: Conjugal transfer protein TrbC; KEGG: mlo:mlr6398 conjugal transfer protein TrbC.
 
     0.947
Hbal_0664
PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: pla:Plav_1838 conjugal transfer ATPase TrbE.
 
     0.946
Hbal_0657
KEGG: pla:Plav_1844 hypothetical protein.
 
     0.937
Hbal_0667
TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: mlo:mlr6397 conjugal transfer protein TraB.
 
     0.875
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.