STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1228PFAM: ROSMUCR transcriptional regulator; KEGG: msl:Msil_1673 transcriptional regulator, MucR family. (143 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.705
Hbal_0231
PFAM: protein of unknown function DUF218; KEGG: cak:Caul_3219 hypothetical protein.
  
     0.629
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.626
Hbal_0444
PFAM: protein of unknown function DUF1321; KEGG: pla:Plav_2446 hypothetical protein.
  
     0.621
Hbal_1926
PFAM: DNA polymerase III chi subunit HolC; KEGG: cak:Caul_2532 DNA polymerase III subunit chi.
  
     0.610
Hbal_2339
KEGG: pzu:PHZ_c0201 hypothetical protein.
  
     0.582
Hbal_1222
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: swd:Swoo_3951 Na+/H+ antiporter MnhB subunit-related protein.
       0.571
Hbal_0371
Transcriptional regulator, ArsR family; PFAM: Methyltransferase type 11; regulatory protein ArsR; Methyltransferase type 12; SMART: regulatory protein ArsR; KEGG: mrd:Mrad2831_2125 ArsR family transcriptional regulator.
  
   
 0.545
Hbal_2941
KEGG: ccs:CCNA_03428 cytosolic protein.
  
     0.518
Hbal_1219
PFAM: cation antiporter; KEGG: sse:Ssed_3661 cation antiporter.
       0.516
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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