STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1312KEGG: pla:Plav_1490 hypothetical protein. (183 aa)    
Predicted Functional Partners:
Hbal_1313
KEGG: pla:Plav_1491 AMP-dependent synthetase and ligase.
  
 0.965
Hbal_1308
KEGG: sse:Ssed_0327 hypothetical protein.
 
   
 0.903
Hbal_1311
PFAM: phosphopantetheine-binding; KEGG: vfm:VFMJ11_0885 acyl carrier protein.
 
     0.900
Hbal_1309
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: pla:Plav_1487 phospholipid/glycerol acyltransferase.
 
     0.895
Hbal_1310
PFAM: phosphopantetheine-binding; KEGG: csa:Csal_2749 acyl carrier protein, putative.
 
     0.895
Hbal_1300
KEGG: pla:Plav_1500 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ.
 
  
 0.820
Hbal_1295
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
   
 0.815
Hbal_1296
KEGG: pla:Plav_1496 putative lipoprotein transmembrane.
 
     0.804
Hbal_1293
PFAM: lipid A biosynthesis acyltransferase; KEGG: bpy:Bphyt_3059 glycosyl transferase family 2.
 
     0.803
Hbal_1294
KEGG: pla:Plav_1494 thioesterase superfamily protein.
 
     0.803
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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