STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hbal_1961KEGG: noc:Noc_1208 hypothetical protein. (330 aa)    
Predicted Functional Partners:
Hbal_1960
KEGG: noc:Noc_1207 hypothetical protein.
       0.790
Hbal_1962
KEGG: noc:Noc_1209 hypothetical protein.
       0.790
Hbal_1963
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: ccr:CC_2425 HfsE.
       0.457
Hbal_1964
PFAM: glycosyl transferase family 2; KEGG: cak:Caul_1537 glycosyl transferase family protein.
       0.451
Hbal_1965
PFAM: polysaccharide deacetylase; KEGG: cak:Caul_1536 polysaccharide deacetylase.
       0.451
Hbal_1966
PFAM: glycosyl transferase family 2; KEGG: cak:Caul_1352 glycosyl transferase family protein.
       0.451
Hbal_1959
PFAM: protein of unknown function DUF159; KEGG: tmz:Tmz1t_2360 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family.
       0.445
Your Current Organism:
Hirschia baltica
NCBI taxonomy Id: 582402
Other names: H. baltica ATCC 49814, Hirschia baltica ATCC 49814, Hirschia baltica DSM 5838, Hirschia baltica str. ATCC 49814, Hirschia baltica strain ATCC 49814
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.