STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hden_1508TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rpt:Rpal_1856 heavy metal translocating P-type ATPase; SMART: TRASH domain protein. (858 aa)    
Predicted Functional Partners:
Hden_0591
TIGRFAM: nitrite reductase, copper-containing; KEGG: oca:OCAR_7249 copper-containing nitrite reductase; PFAM: multicopper oxidase type 3; Belongs to the multicopper oxidase family.
  
 0.883
Hden_1509
PFAM: protein of unknown function DUF156; KEGG: oca:OCAR_7636 hypothetical protein.
 
  
 0.789
Hden_0304
PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: azl:AZL_c02540 multicopper oxidase type 3.
 
  
 0.740
Hden_3049
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: reh:H16_B0945 pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.719
Hden_3427
PFAM: protein of unknown function DUF411; KEGG: mes:Meso_4389 hypothetical protein.
 
   
 0.660
Hden_2952
KEGG: mlo:mlr2863 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain.
   
   0.639
Hden_0734
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein; KEGG: pmy:Pmen_2542 oxidoreductase FAD/NAD(P)-binding subunit.
  
  
 0.637
Hden_1365
GAF sensor hybrid histidine kinase; KEGG: bja:bll2599 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver.
  
  
 0.575
Hden_1681
PFAM: cation efflux protein; KEGG: mes:Meso_4140 putative transporter.
 
  
 0.564
argG
TIGRFAM: argininosuccinate synthase; KEGG: ara:Arad_4374 argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.527
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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