STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgRYcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. (253 aa)    
Predicted Functional Partners:
Mmol_0952
PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: har:HEAR1903 negative regulator of flagellin synthesis (partial).
 
  
 0.830
Mmol_0922
TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: mfa:Mfla_1983 flagellar protein FliS.
 
  
 0.780
Mmol_0921
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
    0.757
Mmol_0934
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: mfa:Mfla_1971 flagellar motor switch protein FliM.
 
 
 0.738
Mmol_0941
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: mfa:Mfla_1963 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.727
Mmol_1261
PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_1939 flagellar motor protein MotB.
 
 
 0.720
Mmol_0820
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
    0.691
Mmol_0936
PFAM: flagellar biosynthesis protein FliO; KEGG: mfa:Mfla_1969 flagellar biosynthesis protein, FliO.
 
    0.685
Mmol_0953
PFAM: FlgN family protein; KEGG: mfa:Mfla_1951 FlgN.
  
  
 0.670
Mmol_0932
PFAM: flagellar hook-length control protein; KEGG: mfa:Mfla_1973 flagellar hook-length control protein.
 
    0.649
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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