STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caka_1459Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (885 aa)    
Predicted Functional Partners:
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.929
Caka_2210
TIGRFAM: pyruvate kinase; KEGG: ote:Oter_1561 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
     
 0.927
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
 0.927
mqo
TIGRFAM: malate/quinone oxidoreductase; KEGG: pmy:Pmen_3677 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase.
     
 0.927
pckG
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
     
 0.918
Caka_2519
KEGG: ote:Oter_4089 pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein; Belongs to the PEP-utilizing enzyme family.
     
 0.911
Caka_0796
TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: ote:Oter_3314 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit.
     
  0.900
Caka_2960
KEGG: ote:Oter_4094 hypothetical protein.
     
  0.900
Caka_2362
TIGRFAM: citrate synthase I; KEGG: ote:Oter_0186 citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
     
 0.855
Caka_0347
PFAM: DMSO reductase anchor subunit (DmsC); 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: scl:sce8492 putative anaerobic reductase component.
     
 0.811
Your Current Organism:
Coraliomargarita akajimensis
NCBI taxonomy Id: 583355
Other names: C. akajimensis DSM 45221, Coraliomargarita akajimensis DSM 45221, Coraliomargarita akajimensis str. DSM 45221, Coraliomargarita akajimensis strain DSM 45221
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