node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Caka_0022 | rplD | Caka_0022 | Caka_1689 | KEGG: ote:Oter_3930 hypothetical protein. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.934 |
Caka_0022 | rplJ | Caka_0022 | Caka_2708 | KEGG: ote:Oter_3930 hypothetical protein. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.929 |
Caka_0022 | rplL | Caka_0022 | Caka_2709 | KEGG: ote:Oter_3930 hypothetical protein. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.833 |
Caka_0022 | rplP | Caka_0022 | Caka_1682 | KEGG: ote:Oter_3930 hypothetical protein. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.934 |
Caka_0022 | rplU | Caka_0022 | Caka_1273 | KEGG: ote:Oter_3930 hypothetical protein. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.930 |
Caka_0022 | rpsB | Caka_0022 | Caka_2487 | KEGG: ote:Oter_3930 hypothetical protein. | KEGG: ote:Oter_4501 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.929 |
Caka_0022 | tsf | Caka_0022 | Caka_2488 | KEGG: ote:Oter_3930 hypothetical protein. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.956 |
frr | pyrH | Caka_2855 | Caka_2856 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.990 |
frr | rplD | Caka_2855 | Caka_1689 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.940 |
frr | rplJ | Caka_2855 | Caka_2708 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.821 |
frr | rplL | Caka_2855 | Caka_2709 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.795 |
frr | rplP | Caka_2855 | Caka_1682 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.957 |
frr | rplU | Caka_2855 | Caka_1273 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.921 |
frr | rpsB | Caka_2855 | Caka_2487 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | KEGG: ote:Oter_4501 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.979 |
frr | tsf | Caka_2855 | Caka_2488 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.961 |
pyrH | frr | Caka_2856 | Caka_2855 | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.990 |
pyrH | rpsB | Caka_2856 | Caka_2487 | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | KEGG: ote:Oter_4501 ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.954 |
pyrH | tsf | Caka_2856 | Caka_2488 | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.920 |
rplD | Caka_0022 | Caka_1689 | Caka_0022 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | KEGG: ote:Oter_3930 hypothetical protein. | 0.934 |
rplD | frr | Caka_1689 | Caka_2855 | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.940 |