STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apau_1044parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR004437:IPR003115; KEGG: tai:Taci_0656 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: D1B9D9 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family. (373 aa)    
Predicted Functional Partners:
Apau_2356
COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: tai:Taci_1723 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; SPTR: D1B7E6 Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 0.985
Apau_1045
O-antigen polymerase; InterPro IPR007016; KEGG: tai:Taci_0657 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: D1B9E0 O-antigen polymerase; PFAM: O-Antigen ligase.
       0.790
Apau_1046
Hypothetical protein; InterPro IPR012902:IPR001120; KEGG: pzu:PHZ_c0660 type II secretion system protein J; SPTR: C1TK53 Prepilin-type N-terminal cleavage/methylation domain-containing protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.785
Apau_1047
COGs: COG3156 Type II secretory pathway component PulK; KEGG: dma:DMR_28510 general secretion pathway protein K; SPTR: C1TK52 Putative uncharacterized protein; PFAM: General secretion pathway protein K.
     
 0.772
Apau_1452
Cell division FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: tai:Taci_0907 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: D1BA37 Cell divisionFtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
  
   
 0.751
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.748
Apau_1048
Hypothetical protein; KEGG: afw:Anae109_0859 molybdenum cofactor biosynthesis protein A; SPTR: C1TK51 Putative uncharacterized protein; PFAM: General secretion pathway protein L (GspL); TIGRFAM: general secretion pathway protein L.
       0.638
Apau_1049
KEGG: hypothetical protein; SPTR: C1TK50 Putative uncharacterized protein.
       0.638
Apau_1050
Hypothetical protein; KEGG: tgr:Tgr7_0101 major facilitator transporter; SPTR: C1TK49 Putative uncharacterized protein.
       0.638
Apau_1051
Hypothetical protein; InterPro IPR001478; KEGG: scl:sce9221 general secretion pathway protein C fragment; SPTR: C1TK48 Putative uncharacterized protein.
       0.638
Your Current Organism:
Aminomonas paucivorans
NCBI taxonomy Id: 584708
Other names: A. paucivorans DSM 12260, Aminomonas paucivorans DSM 12260, Aminomonas paucivorans str. DSM 12260, Aminomonas paucivorans strain DSM 12260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.