STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
EER73836.1Putative cell division protein FtsL; Pfam: PF04977. (128 aa)    
Predicted Functional Partners:
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
   
 
 0.936
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
 
 
 0.626
EER74532.1
Hypothetical protein; Belongs to the HesB/IscA family.
  
     0.602
EER75701.1
Hypothetical protein.
  
     0.599
EER73837.1
S4 domain protein; COG: COG1188; Pfam: PF01479.
  
    0.565
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
  
    0.557
EER73838.1
Polysaccharide biosynthesis protein; COG: COG2244; Pfam: PF01943.
       0.548
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.546
EER75460.1
Hypothetical protein; Pfam: PF00149.
  
     0.515
EER75692.1
Hypothetical protein.
  
     0.513
Your Current Organism:
Weissella paramesenteroides
NCBI taxonomy Id: 585506
Other names: W. paramesenteroides ATCC 33313, Weissella paramesenteroides ATCC 33313, Weissella paramesenteroides str. ATCC 33313, Weissella paramesenteroides strain ATCC 33313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.