STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48702.1Hypothetical protein; Pfam: PF02498. (74 aa)    
Predicted Functional Partners:
iscS
Aminotransferase, class V; COG: COG1104; Pfam: PF00266; InterPro: IPR000192.
   
 0.989
thiF
Molybdopterin biosynthesis protein MoeB; COG: COG0476; Pfam: PF00899,PF05237,PF00581; InterPro: IPR016040.
  
 
 0.900
EFG47954.1
Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753,PF00581; InterPro: IPR001279.
  
 
 0.827
fdxA
4Fe-4S binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
  
 0.566
cysK
Cysteine synthase A; COG: COG0031; Pfam: PF00291; InterPro: IPR005859; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.509
EFG47406.1
Pyridine nucleotide-disulfide oxidoreductase; Pfam: PF07992,PF00070; InterPro: IPR013027.
    
 0.475
fdnG
Molybdopterin oxidoreductase Fe4S4 domain protein; COG: COG0243; Pfam: PF04879; InterPro: IPR006963.
    
 0.475
EFG47329.1
Cysteine-rich domain protein; COG: COG0247; Pfam: PF02754; InterPro: IPR004017.
   
  0.467
sseA
Rhodanese-like protein; COG: COG2897; Pfam: PF00581; InterPro: IPR001763.
  
 
 0.452
EFG48703.1
LGFP repeat protein; COG: COG3786; Pfam: PF08310; InterPro: IPR013207.
       0.450
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.