STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48716.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
EFG48715.1
Hypothetical protein; COG: COG2856; Pfam: PF06114; InterPro: IPR010359.
 
  
 0.986
EFG47999.1
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein.
   
 
 0.734
EFG48712.1
Hypothetical protein; COG: COG3189; Pfam: PF04343; InterPro: IPR007438; 2.1.1.107.
       0.521
dadA
FAD dependent oxidoreductase; COG: COG0665; Pfam: PF01266; InterPro: IPR006076.
       0.521
EFG48714.1
Hypothetical protein.
       0.521
EFG48711.1
Hypothetical protein; Pfam: PF01266; InterPro: IPR006076.
       0.423
ydbS
enoyl-CoA hydratase/isomerase family protein; COG: COG1024; Pfam: PF00378; InterPro: IPR001753.
       0.405
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.