STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48687.1Transcriptional regulator, TetR family; Pfam: PF00440. (183 aa)    
Predicted Functional Partners:
EFG48688.1
Acetyltransferase, GNAT family; COG: COG1670; Pfam: PF00583; InterPro: IPR016181.
 
     0.865
EFG47986.1
Hypothetical protein.
  
     0.647
EFG48446.1
Hypothetical protein.
  
     0.610
EFG48678.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF00149,PF00746.
  
     0.559
EFG47655.1
Actinobacterial surface-anchored domain protein.
  
     0.554
EFG48693.1
Hypothetical protein.
  
 
   0.499
EFG48684.1
Glyoxalase family protein; Pfam: PF00903; InterPro: IPR004360.
 
     0.483
EFG48444.1
Transcriptional regulator, MarR family; Pfam: PF01047.
  
    0.479
EFG48685.1
Cytochrome C biogenesis protein transmembrane region; Pfam: PF02683.
       0.449
EFG48686.1
DsbA-like protein; COG: COG1651; Pfam: PF01323; InterPro: IPR001853.
       0.449
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.