STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48585.1Glyoxalase family protein; Pfam: PF00903. (133 aa)    
Predicted Functional Partners:
EFG48586.1
HTH domain protein; Pfam: PF08279; InterPro: IPR013196.
 
     0.862
EFG48556.1
Carbamoyl-phosphate synthase L chain, ATP binding domain protein; COG: COG4799; Pfam: PF00289,PF02786,PF02785,PF01039; InterPro: IPR013816.
  
 
 0.777
EFG47954.1
Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753,PF00581; InterPro: IPR001279.
   
 
 0.714
EFG46793.1
AMP-binding enzyme; Pfam: PF00561,PF00501; InterPro: IPR000873.
  
 
 0.589
EFG48530.1
Hypothetical protein.
  
     0.558
sdhC
Succinate dehydrogenase, cytochrome b556 subunit; COG: COG2009; Pfam: PF01127; InterPro: IPR014314.
   
    0.557
EFG46652.1
Hypothetical protein.
  
    0.536
dkgB
Oxidoreductase, aldo/keto reductase family protein; COG: COG0656; Pfam: PF00248; InterPro: IPR001395.
   
 0.516
EFG46398.1
Flavin reductase-like protein; Pfam: PF01613; InterPro: IPR012349.
 
 
 0.507
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.433
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.