STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48479.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
EFG48633.1
Hypothetical protein.
  
     0.762
EFG47931.1
Hypothetical protein.
  
     0.762
EFG48155.1
Hypothetical protein.
  
     0.755
EFG48153.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF00746.
  
     0.743
EFG48243.1
Hypothetical protein.
  
     0.739
EFG47420.1
Hypothetical protein.
  
     0.734
EFG47859.1
Von Willebrand factor type A domain protein; Pfam: PF00092.
  
     0.725
EFG48150.1
Hypothetical protein.
  
     0.687
aphD
Streptomycin 6-kinase; Pfam: PF04655; InterPro: IPR006748.
  
     0.682
EFG48415.1
Hypothetical protein.
  
     0.668
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.