STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48484.1ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593. (251 aa)    
Predicted Functional Partners:
EFG48485.1
Periplasmic binding protein; COG: COG0614; Pfam: PF01497; InterPro: IPR002491.
 
 0.993
fhuB
Iron chelate uptake ABC transporter, FeCT family, permease protein; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.980
hmuU2
Putative corrinoid ABC transporter permease; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.970
hmuU
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.969
EFG46530.1
Periplasmic binding protein; Pfam: PF01497; InterPro: IPR002491.
 
 0.901
hmuT
Periplasmic binding protein; COG: COG4558; Pfam: PF01497; InterPro: IPR002491.
 
 0.805
EFG48487.1
Siderophore-interacting FAD-binding domain protein; COG: COG2375; Pfam: PF08021,PF04954; InterPro: IPR007037.
  
 0.578
EFG47919.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG4606; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.572
lolD
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003439.
  
    0.563
gabT
4-aminobutyrate transaminase; COG: COG0160; Pfam: PF00202; InterPro: IPR004632; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.438
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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