STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48529.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
EFG48530.1
Hypothetical protein.
  
    0.805
EFG46715.1
Acetyltransferase, GNAT family; Pfam: PF00583.
  
     0.541
EFG47245.1
Hypothetical protein.
  
    0.521
EFG48235.1
Hypothetical protein.
  
     0.501
ung
Putative uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.500
EFG48480.1
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
     0.471
hpaE
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Pfam: PF00171; InterPro: IPR015590; Belongs to the aldehyde dehydrogenase family.
       0.468
EFG47050.1
Hypothetical protein.
  
     0.462
EFG47152.1
Hypothetical protein; COG: COG2508.
  
     0.433
EFG48531.1
Cold-shock DNA-binding domain protein; COG: COG1278; Pfam: PF00313; InterPro: IPR012340.
       0.429
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.