STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48530.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
EFG48529.1
Hypothetical protein.
  
    0.805
EFG48633.1
Hypothetical protein.
  
     0.690
EFG46770.1
Hypothetical protein.
  
     0.638
EFG46709.1
DivIVA domain repeat protein.
  
     0.638
EFG47931.1
Hypothetical protein.
 
     0.563
EFG48585.1
Glyoxalase family protein; Pfam: PF00903.
  
     0.558
EFG47425.1
Hypothetical protein.
  
     0.522
EFG48479.1
Hypothetical protein.
  
     0.498
EFG48531.1
Cold-shock DNA-binding domain protein; COG: COG1278; Pfam: PF00313; InterPro: IPR012340.
       0.479
hpaE
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Pfam: PF00171; InterPro: IPR015590; Belongs to the aldehyde dehydrogenase family.
       0.468
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.