STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48540.1PspA/IM30 family protein; COG: COG1842; Pfam: PF04012; InterPro: IPR007157. (258 aa)    
Predicted Functional Partners:
EFG48539.1
Hypothetical protein.
 
     0.954
EFG48537.1
Hypothetical protein.
 
     0.903
EFG48663.1
Hypothetical protein; Pfam: PF08044; InterPro: IPR012551.
 
  
 0.829
htpX
Peptidase, M48 family; COG: COG0501; Pfam: PF01435; InterPro: IPR001915; Belongs to the peptidase M48B family.
 
    0.823
EFG48535.1
Hypothetical protein.
  
     0.767
EFG47049.1
Hypothetical protein.
    
 
 0.521
EFG48541.1
WXG100 family type VII secretion target; Pfam: PF06013; Belongs to the WXG100 family.
       0.489
EFG47289.1
Hypothetical protein.
  
     0.479
EFG47261.1
Hypothetical protein.
  
     0.457
cseC
Sensor protein CseC; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
  
 
   0.426
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.