STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE3acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960; Pfam: PF02770,PF00441; InterPro: IPR013764. (400 aa)    
Predicted Functional Partners:
EFG46508.1
Phosphotransferase enzyme family; COG: COG3173; Pfam: PF01636; InterPro: IPR002575.
 
  0.981
fadD4
long-chain-fatty-acid--CoA ligase; COG: COG0318; Pfam: PF00501; InterPro: IPR000873.
  
 
  0.903
EFG48556.1
Carbamoyl-phosphate synthase L chain, ATP binding domain protein; COG: COG4799; Pfam: PF00289,PF02786,PF02785,PF01039; InterPro: IPR013816.
  
 
 0.887
EFG48559.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR002198.
 
     0.819
fadD5
AMP-binding enzyme; COG: COG0318; Pfam: PF00501; InterPro: IPR000873.
  
 
  0.806
etfA
Electron transfer flavoprotein FAD-binding domain protein; COG: COG2025; Pfam: PF01012,PF00766; InterPro: IPR014730.
 
  0.749
EFG46793.1
AMP-binding enzyme; Pfam: PF00561,PF00501; InterPro: IPR000873.
  
  0.736
etfB
Electron transfer flavoprotein domain protein; COG: COG2086; Pfam: PF01012; InterPro: IPR012255.
  
   0.726
crt
enoyl-CoA hydratase/isomerase family protein; COG: COG1024; Pfam: PF00378; InterPro: IPR001753; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.713
menE2
AMP-binding enzyme; COG: COG0318; Pfam: PF00501; InterPro: IPR000873.
   
 
  0.591
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.