STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48564.1Universal stress family protein; Pfam: PF00582; InterPro: IPR014729. (330 aa)    
Predicted Functional Partners:
pgdA
Polysaccharide deacetylase; COG: COG0726; Pfam: PF01522; InterPro: IPR002509.
       0.548
EFG48479.1
Hypothetical protein.
  
     0.510
EFG48566.1
Transglycosylase associated protein; Pfam: PF04226.
  
    0.437
arsC2
HNH endonuclease domain protein; COG: COG1403; Pfam: PF01844; InterPro: IPR003615.
       0.436
EFG47370.1
Hypothetical protein.
  
     0.434
EFG46895.1
Hypothetical protein.
  
     0.429
EFG47838.1
Hypothetical protein.
  
     0.416
EFG46333.1
Hypothetical protein.
  
     0.413
EFG47070.1
Proteasome accessory factor PafA2; Pfam: PF03316,PF03136; InterPro: IPR004347.
  
     0.406
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.