STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48359.1Hypothetical protein; COG: COG1615; Pfam: PF03699; InterPro: IPR005372. (990 aa)    
Predicted Functional Partners:
EFG48358.1
Hypothetical protein; COG: COG3480.
       0.807
EFG48360.1
Hypothetical protein.
       0.773
EFG48357.1
Putative hydrolase; COG: COG5282.
 
     0.657
EFG48362.1
Hypothetical protein; Pfam: PF01420.
 
     0.537
hsdR1
Type I restriction enzyme HsdR protein N-terminal domain protein; COG: COG0610; Pfam: PF04313,PF04851.
 
     0.517
hsdM
N-6 DNA Methylase; COG: COG0286; Pfam: PF02384; InterPro: IPR003356.
 
     0.513
EFG48356.1
Hydrolase, NUDIX family; Pfam: PF00293; InterPro: IPR000086.
  
    0.509
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.