STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG48379.1Serine-type D-Ala-D-Ala carboxypeptidase; Pfam: PF02557; InterPro: IPR003709. (299 aa)    
Predicted Functional Partners:
EFG48059.1
Transglycosylase; COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR001460.
  
  
  0.726
EFG46638.1
Serine-type D-Ala-D-Ala carboxypeptidase; COG: COG1686; Pfam: PF00768; InterPro: IPR001967; Belongs to the peptidase S11 family.
     
 0.718
EFG47326.1
Distant family protein of PhoU.
  
     0.685
EFG48629.1
Hypothetical protein.
  
     0.624
EFG48055.1
Hypothetical protein.
  
     0.593
EFG48415.1
Hypothetical protein.
  
     0.592
EFG47931.1
Hypothetical protein.
  
     0.581
mutT
Hydrolase, NUDIX family; Pfam: PF00293; InterPro: IPR000086.
  
     0.574
EFG46413.1
Hypothetical protein; Dynamin-related; Pfam: PF01926.
  
     0.534
ponA
Transglycosylase; COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR001460.
  
  
  0.518
Your Current Organism:
Brevibacterium mcbrellneri
NCBI taxonomy Id: 585530
Other names: B. mcbrellneri ATCC 49030, Brevibacterium mcbrellneri ATCC 49030, Brevibacterium mcbrellneri str. ATCC 49030, Brevibacterium mcbrellneri strain ATCC 49030
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.